Greater Farallones and Cordell Bank National Marine Sanctuaries Soundscape Report

Ocean Sound Monitoring

Greater Farallones National Marine Sanctuary (GFNMS) and Cordell Bank National Marine Sanctuary (CBNMS) sit offshore of California, near San Francisco, and are jointly managed. CBNMS is bordered by GFNMS, which extends north, south, and east to the coast. Ocean sound monitoring began here in fall 2015 to record low-frequency, ambient sounds. This monitoring location is part of the Noise Reference Station (NRS) Network, which is a collaborative effort with ONMS, the National Marine Fisheries Service, the National Park Service, and the Pacific Marine Environmental Laboratory. This site, NRS11, is deployed near the southern border of CBNMS and its listening range extends into GFNMS. The instrument is suspended in deep water (~550 m) to maximize the listening range of the hydrophone for low-frequency sounds generated within sanctuary waters. Baseline soundscape conditions from the first years of sampling (2015-2017) described seasonal baleen whale vocalizations and ongoing vessel noise propagating from the shipping lanes leading to San Francisco and Oakland.

Monitoring continues at this location to capture sound associated with vessel traffic coming in/out of the Ports of San Francisco and Oakland to the south and west. It's also an area with year-round baleen whale occurrence that increases seasonally.

Summary of monitoring sites

Long-term Monitoring Site	Primary Monitoring Purpose	Oceanographic Setting	Depth (m)	Sampling Rate (kHz)	Known Biological Sounds	Vessel Traffic Setting	Latitude (°)	Longitude (°)	Start Date	Total Recording Days	Funding Partners
NRS11	This site was established near the boundaries of Cordell Bank and Greater Farallones National Marine Sanctuaries to monitor regional long-term trends in ocean noise, particularly from large vessels and baleen whale species presence.	offshore-deep, on continental slope	550	5	Baleen whales	Constant large vessel activity in Traffic Separation Scheme fan approaching ports of San Francisco and Oakland	37.88	-123.44	Oct 2015	3091	NMFS, PMEL, ONMS

Ocean Sound Conditions

Soundscapes vary across years, seasons, and even within a day. Differences are driven by shifts in wind and weather patterns, migration and behavior of animals, and patterns in human activities. We track how sound levels change in different frequencies using standardized soundscape metrics to understand these changes. Seasonal and annual percentiles of all the data are used to define typical conditions.

What are the seasonal patterns across frequencies?

Season is often a main driver of soundscape differences: wind and weather patterns shift, species migrate or change behavior, and humans change their marine activities. As shown on the graphic(s) below, we can visualize the differences by looking at the variation across frequency (pitch of the sound in Hertz/Hz) shown on the x-axis and intensity (how loud the sound is in decibels) shown on the y-axis. The colored lines represent regionally-specific oceanographic seasons, vertical dashed lines and grey shaded areas are the frequency ranges that a sound source of interest can be heard at, and the black lines bound the expected range of modeled sound intensity when only wind noise is present. Each monitoring site has been categorized according to oceanographic setting: shallow is <200 m depth, deep is >=200 m depth, coastal is <25 nm from shore, and offshore is >=25 nm from shore.


Here are some questions to consider when viewing and interacting with the graph(s) below:
(1) Which season has the highest sound levels?
(2) Are there peaks in the sound levels for any of the sounds of interest?
(3) Are the low-frequency sound levels outside the expected range for wind noise?

The new interactive sound level graph offers many new useful features to explore annual and seasonal soundscape conditions. Hover over the grey shaded boxes and black vertical dash lines to see detailed information about the frequencies of interest, and hover over the colorful solid or black dotted median lines for details on the sound levels at each frequency bin by year, season, or overall median. Hover over the monitoring effort graph below to see the number of recording days for each month or season, as well as the threshold for the minimum number of days required for a month to be included in the annual plots.

Select or deselect the visibility of a year or season's sound levels, as well as the effort bars, by clicking on either plot’s legend. Single click on the legend's year or season that you would like to deselect, or 'turn off', or double click on a legend's year or season to view only that line, and ‘turn off’ all others. Deselect all seasonal and yearly median data lines to view only the overall median line, and then double click any year or season’s legend text to make all lines visible again.

The following icons, which you can find at the top right of the sound level and effort figures, let you change your mouse performance, axes display, and hover feature settings.

‘Zoom’ is the default mouse selection, which lets you zoom into the data by drawing a box over the graph.
'Pan' is the other mouse performance option, which allows you to grab and drag the graph.
‘Zoom in’.
‘Zoom out’.
‘Autoscale’ scales the graph axes to what the interactive graph thinks is best.
‘Reset axes’ sets the axes back to their original minimum and maximum values.
'Show closest data on hover' is the default hover mode, which only shows one hover feature at a time.
'Compare data on hover' shows more than one feature at a time.

Seasonal median sound levels (measured by mean-square pressure in micropascal squared per Hz) across a range of frequencies (~10 to ~24,000 Hz) at a given monitoring site, with annual recording effort represented by a bar graph underneath. Each season is a different colored line. Solid black lines show modeled ambient sound levels from wind at 1 m/s (lower line) and 22.6 m/s (upper line) based on hydrophone depth. Frequency bands indicative of a biological or anthropogenic sound source of interest are highlighted in semi-transparent gray and labeled; peak frequency for dominant fish species are labeled with vertical dashed lines. Credit: Megan McKenna and Emma Beretta/CIRES and NOAA

Processing raw audio files to calibrated sound levels (i.e., soundscape metrics) involves multiple steps to get a specified time frequency data product. All soundscape metrics visualized in the soundscape inventory reports are averaged from hybrid millidecade sound levels, calculated using either MANTA or PyPAM software packages. Both softwares calculate mean PSD (dB re 1 µPa^2/Hz) per minute in 1-Hz wide bins using Welch’s method with a Hann window, FFT length equal to the sample rate, and 50% overlap. Following calibration based upon instrument specific sensitivities, PSD values per minute were further processed in hybrid millidecade spectral densities, which are an efficient means of storing PSD spectra from high sample rate audio files using 1-Hz values up to 435 Hz, and then millidecade wide PSD values up to one half of the sample rate (Martin et al. 2021).

PAMscapes was used to calculate hourly median hybrid milli-decade bands (loadSoundscapeData(ncFile, keepQuals = c(1,2)) and binSoundscapeData(hmddata, bin = "1hour", method = c("median")). The hourly data were then matched with an estimate of wind speed at that location using matchGFS in PAMscapes (Global Forecast System (GFS) weather model). Long-term condition plots in these reports were generated by averaging the hourly median hybrid millidecade results within different time constraints (i.e. annual, seasonal) and percentiles (e.g., 25% and 75%) for each hybrid millidecade frequency band. Percentiles are a measurement of data spread with the middle 50% of data falling between the 25th and 75th percentile. To demonstrate ambient sound conditions in the absence of anthropogenic and biological sound sources, an empirical model for wind-generated ocean noise was calculated for each monitoring site based on hydrophone depth and wind speed (Hildebrand et al. 2021). The upper and lower boundaries visualized in the plots are based on Beaufort scale measurements of 0 (no to low wind) to 9 (strong gale).

How are ocean sound conditions changing across years?

We can track changes in ocean soundscape conditions and its contributors by comparing annual sound levels. Efforts to reduce noise impacts to marine animals are underway on local to global scales. Strategies can include avoidance of times and areas when sensitive species are present to reduce vulnerability (e.g., a shipping lane), changing the operation of a potentially hazardous noise source (e.g., by slowing and therefore quieting vessels) or through the design and use of alternative, quieter sources (e.g., new, quieter ship design and/or technologies). The effectiveness of these approaches, and the scales over which they are effective, can be tracked through comprehensive monitoring efforts. A focused analysis is often necessary to tease apart the multiple drivers of ocean sound levels, however, annual summaries provide initial insights to overall patterns.


Here are some questions to consider when viewing the graph(s) below:
(1) Are levels lower in the most recent year of monitoring in any of the frequencies of interest?
(2) Are there peaks in the sound levels for any of the sounds of interest? Do they differ across years?

The new interactive sound level graph offers many new useful features to explore annual and seasonal soundscape conditions. Hover over the grey shaded boxes and black vertical dash lines to see detailed information about the frequencies of interest, and hover over the colorful solid or black dotted median lines for details on the sound levels at each frequency bin by year, season, or overall median. Hover over the monitoring effort graph below to see the number of recording days for each month or season, as well as the threshold for the minimum number of days required for a month to be included in the annual plots.

Select or deselect the visibility of a year or season's sound levels, as well as the effort bars, by clicking on either plot’s legend. Single click on the legend's year or season that you would like to deselect, or 'turn off', or double click on a legend's year or season to view only that line, and ‘turn off’ all others. Deselect all seasonal and yearly median data lines to view only the overall median line, and then double click any year or season’s legend text to make all lines visible again.

The following icons, which you can find at the top right of the sound level and effort figures, let you change your mouse performance, axes display, and hover feature settings.

‘Zoom’ is the default mouse selection, which lets you zoom into the data by drawing a box over the graph.
'Pan' is the other mouse performance option, which allows you to grab and drag the graph.
‘Zoom in’.
‘Zoom out’.
‘Autoscale’ scales the graph axes to what the interactive graph thinks is best.
‘Reset axes’ sets the axes back to their original minimum and maximum values.
'Show closest data on hover' is the default hover mode, which only shows one hover feature at a time.
'Compare data on hover' shows more than one feature at a time.

Annual median sound levels (measured by mean-square pressure in micropascal squared per Hz) across a range of frequencies (~10 to ~24,000 Hz) at a given monitoring site, with annual recording effort represented by a bar graph underneath. Each year is a different blue line, getting darker for every additional year of data. Solid black lines show modeled ambient sound levels from wind at 1 m/s (lower line) and 22.6 m/s (upper line) based on hydrophone depth. Frequency bands indicative of a biological or anthropogenic sound source of interest are highlighted in semi-transparent gray and labeled; peak frequency for dominant fish species are labeled with vertical dashed lines. Credit: Megan McKenna and Emma Beretta/CIRES and NOAA

Is the intensity (loudness) of sound sources of interest within typical range?

In some soundscapes, we can use specific frequencies as indicators for the presence of a source of interest (e.g. species presence and behavior). Monitoring sites are often chosen because a known source that we want to track is present and we can track this dominant sound energy contributor using their specific frequency or frequency range. For example, seasonal migration of humpback whales to Hawaiian Islands results in soundscapes dominated by their calling between 50 and 630 Hz. At sites near commercial shipping lanes, 63 and 125 Hz one-third octave level (TOL) are used as an indicator for ship noise (Haver et al. 2021). At sites where snapping shrimp are present, 4,000 - 18,000 Hz can be used as an indicator of their sounds. Only frequencies that have been identified as reliable for tracking a source of interest are shown below.

Time series plot of daily median sound levels (measured as dB re: 1 µPa) for a specific frequency band(s) of interest at this site, separated by year. Missing sound levels represent periods of time when data were unavailable. Background color shading (blue, purple, gold) indicates low (<25th percentile), typical (25-75th percentile), and high sound levels (>75th percentile) across this monitoring site's entire dataset (all years) at this frequency band(s) for comparability with annual medians, marked with horizontal black dashed lines. Pie charts on the right hand side of the graphic show the proportion of daily median sound levels that fell within each category for each year, following the same color-coding and percentile bins. Credit: Megan McKenna and Emma Beretta/CIRES and NOAA

Ocean Sound Indicators

We can use long-term monitoring of ocean sound to derive and track indicators of ocean conditions. These indicators track the status and trend of habitat condition, species presence, human-use patterns, and management activities. There are many analytical methods used to generate ocean sound indicators. Below are ocean sound indicators relevant to the sanctuary and available for condition tracking.

**Coming soon!**